No there is no reason to turn off you skimmer at night. putting your skimmer pump on a timer will only strain the pump which was not designed to be turned off and on each day. The only time i have turned my skimmer off was twice to clean the skimmer in the last 3 years
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Current Tanks:
New 210 custom 84 x 24 x 24, 60g sump, SWC 250 extreme with bubble blaster 5000, 2 vortech mp40, 2 vortech mp10, 12 T5, Water blaster 5000, warner marine bio pellets,
60g clownfish cube, red carpet anemone with a 25g sump,SRO octopus 1000sss, 250w radium, lumenarc large.
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